Curated BLAST for Genomes


Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 12 curated entries in PaperBLAST's database that match ''.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2630: Methylmalonyl-CoA epimerase (RefSeq)
is similar to:

EPI_CERS4 / Q3IZP4: Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC from Cereibacter sphaeroides

90% id,
100% cov

MCEE_HUMAN / Q96PE7: Methylmalonyl-CoA epimerase, mitochondrial; DL-methylmalonyl-CoA racemase; EC from Homo sapiens
MCEE / Q96PE7: methylmalonyl CoA epimerase (EC from Homo sapiens
Q96PE7: methylmalonyl-CoA epimerase (EC from Homo sapiens

64% id,
75% cov

MCE_PYRHO / O58010: Methylmalonyl-CoA epimerase; DL-methylmalonyl-CoA racemase; EC from Pyrococcus horikoshii

39% id,
94% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory