Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3308: Glutathione S-transferase domain (RefSeq)
is similar to:
PaperBLAST

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

26% id,
96% cov

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

31% id,
77% cov

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

36% id,
49% cov

More...

Dshi_3279: Glutathione S-transferase domain (RefSeq)
is similar to:
PaperBLAST

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

31% id,
69% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

30% id,
69% cov

Dshi_2984: glutathione S-transferase family protein (RefSeq)
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

35% id,
48% cov

MAAI1_DROME / Q9VHD3: Probable maleylacetoacetate isomerase 1; MAAI 1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Drosophila melanogaster

29% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory