Curated BLAST for Genomes


Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 15 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2437: L-rhamnose isomerase (RefSeq)
is similar to:

Dshi_2437: L-rhamnose isomerase (EC from Dinoroseobacter shibae

100% id,
100% cov

RHAA_ECOLI / P32170: L-rhamnose isomerase; RhamIso; EC from Escherichia coli
RhaA / b3903: L-rhamnose isomerase (EC from Escherichia coli
rhaA / P32170: L-rhamnose isomerase (EC from Escherichia coli
P32170: L-rhamnose isomerase (EC from Escherichia coli

56% id,
99% cov

BWI76_RS00675: L-rhamnose isomerase (EC from Klebsiella michiganensis

56% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory