Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 18 curated entries in PaperBLAST's database that match '5.3.1.24' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_2578: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (RefSeq) is similar to: | PaperBLAST |
HIS4_STRCO / P16250: Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor | 44% id, 96% cov |
| Dshi_1029: Phosphoribosylanthranilate isomerase (RefSeq) is similar to: | PaperBLAST |
trpF / GB|AAA21897.1: phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Acinetobacter calcoaceticus | 40% id, 97% cov |
trpF / Q56320: phosphoribosylanthranilate isomerase subunit (EC 5.3.1.24) from Thermotoga maritima | 35% id, 99% cov |
trpF: phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Burkholderia multivorans | 38% id, 90% cov |
| Dshi_2576: imidazoleglycerol phosphate synthase, cyclase subunit (RefSeq) is similar to: | PaperBLAST |
HIS4_STRCO / P16250: Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor | 29% id, 99% cov |
| Dshi_1800: Indole-3-glycerol-phosphate synthase (RefSeq) is similar to: | PaperBLAST |
TrpC / b1262: fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli | 39% id, 58% cov |
P24920: phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Phytophthora parasitica | 41% id, 38% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory