Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 11 curated entries in PaperBLAST's database that match '5.3.1.30' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1267: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
PGA1_c07230: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Phaeobacter inhibens | 75% id, 100% cov |
SMc00432: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Sinorhizobium meliloti | 30% id, 82% cov |
BWI76_RS03075: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Klebsiella michiganensis | 28% id, 82% cov |
| Dshi_1279: Myo-inositol catabolism IolB domain protein (RefSeq) is similar to: | PaperBLAST |
SMc00432: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Sinorhizobium meliloti | 53% id, 98% cov |
AO356_23170: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens | 47% id, 97% cov |
BWI76_RS03075: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Klebsiella michiganensis | 48% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory