Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 43 curated entries in PaperBLAST's database that match '5.3.1.4'.

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3588: KpsF/GutQ family protein (RefSeq)
is similar to:
PaperBLAST

Q3IG38: L-arabinose isomerase (EC 5.3.1.4) from Pseudoalteromonas haloplanktis

41% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory