Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7'.

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2025: protein of unknown function DUF1498 (RefSeq)
is similar to:
PaperBLAST

DLMIS_SERPR / D5MTT1: D-lyxose/D-mannose isomerase; EC 5.3.1.15; EC 5.3.1.7 from Serratia proteamaculans

48% id,
98% cov

DLMIS_ECO57 / A0A6M7H989: D-lyxose/D-mannose isomerase; EC 5.3.1.15; EC 5.3.1.7 from Escherichia coli

45% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory