Curated BLAST for Genomes


Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 4 curated entries in PaperBLAST's database that match ''.

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3481: molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq)
is similar to:

AIS_PSESP / A0A0A1H8I4: Aconitate isomerase; AI; EC from Pseudomonas sp.
A0A0A1H8I4: aconitate DELTA-isomerase (EC from Pseudomonas sp.

26% id,
92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory