Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 18 curated entries in PaperBLAST's database that match '5.4.2.7'.
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_0829: phosphopentomutase (RefSeq) is similar to: | PaperBLAST |
Dshi_0829: Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae | 100% id, 100% cov |
SO1219: Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis | 49% id, 100% cov |
Tlr / b4383: phosphopentomutase (EC 5.4.2.7) from Escherichia coli | 48% id, 100% cov |
Dshi_2397: phosphoglucosamine mutase (RefSeq) is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 32% id, 99% cov |
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe | 23% id, 68% cov |
PGM3_YEAST / Q03262: Phosphoribomutase; PRM; Phosphoglucomutase 3; PGM 3; EC 5.4.2.7 from Saccharomyces cerevisiae | 26% id, 31% cov |
Dshi_1900: Phosphomannomutase (RefSeq) is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 27% id, 97% cov |
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe | 39% id, 14% cov |
PGM3_YEAST / Q03262: Phosphoribomutase; PRM; Phosphoglucomutase 3; PGM 3; EC 5.4.2.7 from Saccharomyces cerevisiae | 39% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory