Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 4 curated entries in PaperBLAST's database that match '5.5.1.27' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_0604: amidohydrolase 2 (RefSeq) is similar to: | PaperBLAST |
A9CEQ7: D-galactarolactone cycloisomerase (EC 5.5.1.27) from Agrobacterium tumefaciens | 31% id, 94% cov |
| Dshi_0867: amidohydrolase 2 (RefSeq) is similar to: | PaperBLAST |
A9CEQ7: D-galactarolactone cycloisomerase (EC 5.5.1.27) from Agrobacterium tumefaciens | 30% id, 94% cov |
| Dshi_2447: Mandelate racemase/muconate lactonizing protein (RefSeq) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 29% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory