Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 1 curated entries in PaperBLAST's database that match '2,4-diketo-3-deoxy-L-rhamnonate hydrolase' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_2542: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (RefSeq) is similar to: | PaperBLAST |
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans | 42% id, 76% cov |
| Dshi_0967: fumarylacetoacetate (FAA) hydrolase (RefSeq) is similar to: | PaperBLAST |
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans | 39% id, 72% cov |
| Dshi_2538: fumarylacetoacetate (FAA) hydrolase (RefSeq) is similar to: | PaperBLAST |
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans | 32% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory