Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1779: acetolactate synthase, large subunit, biosynthetic type (RefSeq) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 47% id, 97% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 44% id, 93% cov |
| Dshi_3840: thiamine pyrophosphate protein TPP binding domain protein (RefSeq) is similar to: | PaperBLAST |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 33% id, 84% cov |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 28% id, 93% cov |
| Dshi_1828: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 27% id, 93% cov |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 24% id, 91% cov |
| Dshi_2045: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 26% id, 94% cov |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 27% id, 91% cov |
| Dshi_0805: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 27% id, 91% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 26% id, 93% cov |
| Dshi_1269: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 26% id, 60% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 4 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 48780-50888 (frame -2) on 57147 is similar to: | PaperBLAST |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 33% id, 89% cov |
| 1907408-1909210 (frame -2) on 57145 is similar to: | PaperBLAST |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 27% id, 94% cov |
| 2163131-2165968 (frame +2) on 57145 is similar to: | PaperBLAST |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 26% id, 96% cov |
| 812267-814075 (frame +2) on 57145 is similar to: | PaperBLAST |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 26% id, 95% cov |
Lawrence Berkeley National Laboratory