Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 1 curated entries in PaperBLAST's database that match 'acetohydroxyacid synthase subunit B' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1779: acetolactate synthase, large subunit, biosynthetic type (RefSeq) is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 54% id, 97% cov |
| Dshi_0805: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 26% id, 97% cov |
| Dshi_1828: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 27% id, 92% cov |
| Dshi_3840: thiamine pyrophosphate protein TPP binding domain protein (RefSeq) is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 27% id, 89% cov |
| Dshi_2045: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 26% id, 91% cov |
| Dshi_1269: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 26% id, 49% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1848195-1850099 (frame +3) on 57145 is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 54% id, 98% cov |
| 48780-50888 (frame -2) on 57147 is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 27% id, 92% cov |
Lawrence Berkeley National Laboratory