Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1002: Cystathionine gamma-synthase (RefSeq) is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 40% id, 88% cov |
| Dshi_2410: O-succinylhomoserine sulfhydrylase (RefSeq) is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 36% id, 89% cov |
| Dshi_0793: O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq) is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 35% id, 57% cov |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 34% id, 34% cov |
| Dshi_1623: cysteine desulfurase, SufS subfamily (RefSeq) is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 36% id, 17% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2546756-2548015 (frame +2) on 57145 is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 35% id, 92% cov |
| 800133-801647 (frame -1) on 57145 is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 33% id, 60% cov |
Lawrence Berkeley National Laboratory