Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 6 curated entries in PaperBLAST's database that match 'glutamylputrescine oxidase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_2227: FAD dependent oxidoreductase (RefSeq) is similar to: | PaperBLAST |
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens | 41% id, 99% cov |
Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens | 40% id, 100% cov |
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli | 38% id, 99% cov |
Dshi_1829: FAD dependent oxidoreductase (RefSeq) is similar to: | PaperBLAST |
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens | 29% id, 99% cov |
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli | 29% id, 99% cov |
Dshi_0335: pyridine nucleotide-disulphide oxidoreductase dimerisation region (RefSeq) is similar to: | PaperBLAST |
AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens | 28% id, 26% cov |
Dshi_3895: Gluconate 2-dehydrogenase (acceptor) (RefSeq) is similar to: | PaperBLAST |
PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli | 62% id, 7% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory