Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1649: alpha amylase catalytic region (RefSeq)
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

34% id,
90% cov

Dshi_3898: alpha amylase catalytic region (RefSeq)
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

31% id,
85% cov

Dshi_1824: alpha amylase catalytic region (RefSeq)
is similar to:
PaperBLAST

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

30% id,
83% cov

AAQ93678.1: sucrose hydrolase (Suh) (EC 3.2.1.-)

30% id,
83% cov

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

29% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory