Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough JW710 (DvH)

Found 16 curated entries in PaperBLAST's database that match '4.2.1.9' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough JW710, or try another query

DVU3373: dihydroxy-acid dehydratase (TIGR)
is similar to:
PaperBLAST

ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus

54% id,
100% cov

ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis

49% id,
96% cov

Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus

44% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory