Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 19 curated entries in PaperBLAST's database that match '1.1.1.103' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_0039: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli
Tdh / b3616: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
tdh / P07913: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
P07913: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Escherichia coli

65% id,
100% cov

PGA1_c34320: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Phaeobacter inhibens

54% id,
100% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

46% id,
99% cov

More...

N515DRAFT_2489: alcohol dehydrogenase, propanol-preferring
is similar to:
PaperBLAST

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

33% id,
99% cov

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

33% id,
99% cov

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

32% id,
99% cov

More...

N515DRAFT_3331: S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

32% id,
99% cov

N515DRAFT_0878: alcohol dehydrogenase
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

30% id,
97% cov

TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii
O58389: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Pyrococcus horikoshii

30% id,
79% cov

TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus

30% id,
79% cov

More...

N515DRAFT_2454: alcohol dehydrogenase, propanol-preferring
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

28% id,
99% cov

N515DRAFT_3201: UDP-glucose 4-epimerase
is similar to:
PaperBLAST

RR42_RS28300: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Cupriavidus basilensis

25% id,
92% cov

N515DRAFT_0381: uncharacterized zinc-type alcohol dehydrogenase-like protein
is similar to:
PaperBLAST

TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli
Tdh / b3616: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
tdh / P07913: threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli
P07913: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Escherichia coli

26% id,
89% cov

N515DRAFT_1836: NADPH:quinone reductase
is similar to:
PaperBLAST

TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus

40% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory