Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 5 curated entries in PaperBLAST's database that match '1.1.1.173' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 21 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_1006: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

39% id,
98% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

36% id,
97% cov

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

34% id,
97% cov

More...

N515DRAFT_1583: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

39% id,
97% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

38% id,
96% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

36% id,
96% cov

More...

N515DRAFT_0557: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

37% id,
97% cov

N515DRAFT_2826: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

36% id,
98% cov

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

34% id,
98% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

34% id,
98% cov

More...

N515DRAFT_3338: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

36% id,
96% cov

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

34% id,
98% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

33% id,
96% cov

N515DRAFT_2399: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

36% id,
98% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

36% id,
98% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

36% id,
97% cov

N515DRAFT_0879: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

36% id,
98% cov

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

33% id,
98% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

30% id,
98% cov

N515DRAFT_1253: 2-dehydro-3-deoxy-L-fuconate dehydrogenase (EC 1.1.1.-)
is similar to:
PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

36% id,
96% cov

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

33% id,
97% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

32% id,
98% cov

More...

N515DRAFT_0334: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

35% id,
97% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

34% id,
97% cov

N515DRAFT_1104: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

34% id,
98% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

34% id,
97% cov

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

33% id,
98% cov

N515DRAFT_0839: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

34% id,
96% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

33% id,
96% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

31% id,
95% cov

N515DRAFT_2198: Tropinone reductase 1
is similar to:
PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

34% id,
97% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

33% id,
98% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

29% id,
98% cov

More...

N515DRAFT_0944: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

34% id,
96% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

33% id,
96% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

33% id,
95% cov

More...

N515DRAFT_2754: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

33% id,
97% cov

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

30% id,
97% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

30% id,
96% cov

N515DRAFT_3730: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

32% id,
98% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

30% id,
97% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

27% id,
96% cov

N515DRAFT_2616: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

30% id,
98% cov

N515DRAFT_2999: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

30% id,
98% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

28% id,
99% cov

N515DRAFT_1230: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

30% id,
94% cov

N515DRAFT_3311: citronellol/citronellal dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

29% id,
97% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

34% id,
75% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

30% id,
76% cov

N515DRAFT_0851: hypothetical protein
is similar to:
PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

30% id,
81% cov

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

29% id,
75% cov

N515DRAFT_4249: NADP-dependent 3-hydroxy acid dehydrogenase YdfG
is similar to:
PaperBLAST

RM1DH_PICST / A3LZU7: L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis
LRA1 / A3LZU7: NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis

27% id,
81% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

29% id,
75% cov

BPHYT_RS28235: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans

28% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 20 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory