Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 44 curated entries in PaperBLAST's database that match '1.1.1.44' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_4155: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44)
is similar to:		 PaperBLAST

6PGD_ECOLI / P00350: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Escherichia coli
Gnd / b2029: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli
gnd / P00350: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli
P00350: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Escherichia coli

 75% id,
99% cov

Q762L5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Klebsiella pneumoniae

 75% id,
99% cov

P96789: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Lactococcus lactis

 69% id,
99% cov

More...

N515DRAFT_2625: 6-phosphogluconate dehydrogenase
is similar to:		 PaperBLAST

Q2RIZ2: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica

 47% id,
100% cov

A0A1J5NX54: phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica

 47% id,
100% cov

6PGD_BACSU / P80859: 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; GNTZII; EC 1.1.1.44 from Bacillus subtilis
gndA / P80859: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) from Bacillus subtilis
P80859: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Bacillus subtilis

 38% id,
64% cov

More...

N515DRAFT_2996: 3-hydroxyisobutyrate dehydrogenase
is similar to:		 PaperBLAST

Q2RIZ2: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica

 27% id,
84% cov

A0A1J5NX54: phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica

 27% id,
85% cov

6PGD1_ARATH / Q9SH69: 6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic; EC 1.1.1.44 from Arabidopsis thaliana
Q9SH69: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana

 27% id,
56% cov

More...

N515DRAFT_1074: 3-hydroxyisobutyrate dehydrogenase
is similar to:		 PaperBLAST

Q762L5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Klebsiella pneumoniae

 25% id,
43% cov

6PGD_ECOLI / P00350: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Escherichia coli
Gnd / b2029: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli
gnd / P00350: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli
P00350: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Escherichia coli

 24% id,
43% cov

6PGD_BACSU / P80859: 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; GNTZII; EC 1.1.1.44 from Bacillus subtilis
gndA / P80859: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) from Bacillus subtilis
P80859: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Bacillus subtilis

 24% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory