Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 24 curated entries in PaperBLAST's database that match '1.1.3.2'.

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_2226: FAD/FMN-containing dehydrogenases
is similar to:
PaperBLAST

HEXNO_RALSU / A3RXB7: N-acetyl-D-hexosamine oxidase; HexNAcO; EC 1.1.3.29 from Ralstonia solanacearum
A3RXB7: N-acylhexosamine oxidase (EC 1.1.3.29) from Ralstonia solanacearum

47% id,
99% cov

N515DRAFT_1250: L-lactate dehydrogenase (cytochrome)
is similar to:
PaperBLAST

Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp.

44% id,
99% cov

F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii

36% id,
93% cov

Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans

33% id,
47% cov

More...

N515DRAFT_3909: homodimeric glycerol 3-phosphate dehydrogenase (quinone) (EC 1.1.5.3)
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

29% id,
82% cov

Q833L7: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis

30% id,
70% cov

N515DRAFT_4337: Choline dehydrogenase
is similar to:
PaperBLAST

Q6CEP8: long-chain-alcohol oxidase (EC 1.1.3.20) from Yarrowia lipolytica

33% id,
53% cov

N515DRAFT_2675: IMP dehydrogenase
is similar to:
PaperBLAST

F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii

22% id,
53% cov

N515DRAFT_1321: Choline dehydrogenase
is similar to:
PaperBLAST

FAO3_ARATH / Q9LW56: Long-chain-alcohol oxidase FAO3; Long-chain fatty alcohol oxidase 3; EC 1.1.3.20 from Arabidopsis thaliana
AtFAO3 / Q9LW56: long-chain-alcohol oxidase (EC 1.1.3.20) from Arabidopsis thaliana

22% id,
31% cov

FAO1_LOTJA / B5WWZ8: Long-chain-alcohol oxidase FAO1; Long-chain fatty alcohol oxidase 1; EC 1.1.3.20 from Lotus japonicus

24% id,
13% cov

FAO1_LOTJA / B5WWZ8: Long-chain-alcohol oxidase FAO1; Long-chain fatty alcohol oxidase 1; EC 1.1.3.20 from Lotus japonicus

44% id,
6% cov

More...

N515DRAFT_0017: alkyl hydroperoxide reductase subunit F
is similar to:
PaperBLAST

GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus
glpO / O86963: glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus casseliflavus

28% id,
23% cov

N515DRAFT_2933: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
is similar to:
PaperBLAST

F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii

47% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

88378-90021 (frame -2) on N515DRAFT_scaffold00009.9
is similar to:
PaperBLAST

Q6CEP8: long-chain-alcohol oxidase (EC 1.1.3.20) from Yarrowia lipolytica
Also see hits to annotated proteins above

33% id,
54% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory