Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 30 curated entries in PaperBLAST's database that match '1.13.11.11' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_0357: tryptophan 2,3-dioxygenase
is similar to:		 PaperBLAST

T23O_XANCP / Q8PDA8: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Xanthomonas campestris
kynA: tryptophan 2,3-dioxygenase; EC 1.13.11.11 from Xanthomonas campestris
Q8PDA8: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Xanthomonas campestris

 71% id,
94% cov

RR42_RS15390: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Cupriavidus basilensis

 51% id,
91% cov

T23O_CUPMC / Q1LK00: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Cupriavidus metallidurans
kynA: tryptophan 2,3-dioxygenase; EC 1.13.11.11 from Ralstonia metallidurans

 50% id,
90% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory