Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 13 curated entries in PaperBLAST's database that match '1.2.1.39'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3729: aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase
is similar to:
PaperBLAST

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

41% id,
99% cov

pedI / B1N7J6: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

41% id,
95% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

40% id,
97% cov

More...

N515DRAFT_4224: coniferyl-aldehyde dehydrogenase
is similar to:
PaperBLAST

ALDH3A2 / P51648: fatty aldehyde dehydrogenase (EC 1.2.1.3; EC 1.2.1.94; EC 1.2.1.39) from Homo sapiens

38% id,
87% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

31% id,
83% cov

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens

32% id,
79% cov

More...

N515DRAFT_0379: Acyl-CoA reductase
is similar to:
PaperBLAST

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

34% id,
95% cov

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

33% id,
96% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

33% id,
94% cov

More...

N515DRAFT_4232: L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

32% id,
96% cov

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

31% id,
94% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

32% id,
91% cov

More...

N515DRAFT_0465: aldehyde dehydrogenase (NAD+)
is similar to:
PaperBLAST

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

32% id,
94% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

31% id,
93% cov

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

29% id,
94% cov

More...

N515DRAFT_2488: succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

31% id,
92% cov

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

31% id,
93% cov

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

30% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

203574-205202 (frame -1) on N515DRAFT_scaffold00008.8
is similar to:
PaperBLAST

ALDH3A2 / P51648: fatty aldehyde dehydrogenase (EC 1.2.1.3; EC 1.2.1.94; EC 1.2.1.39) from Homo sapiens
Also see hits to annotated proteins above

37% id,
92% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory