Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 23 curated entries in PaperBLAST's database that match '1.4.3.3' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3723: D-amino-acid dehydrogenase
is similar to:
PaperBLAST

amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida

28% id,
99% cov

thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis

24% id,
46% cov

N515DRAFT_0958: Glycine/D-amino acid oxidase (deaminating)
is similar to:
PaperBLAST

thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis

25% id,
94% cov

amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida

27% id,
76% cov

N515DRAFT_2697: gamma-glutamylputrescine oxidase
is similar to:
PaperBLAST

thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis

23% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory