Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 114 curated entries in PaperBLAST's database that match '2.7.1.13'.

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_2849: lipid-A-disaccharide kinase
is similar to:
PaperBLAST

LPXK_ECOLI / P27300: Tetraacyldisaccharide 4'-kinase; Lipid A 4'-kinase; EC 2.7.1.130 from Escherichia coli
YcaH / b0915: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli
lpxK / P27300: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli
P27300: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli

47% id,
94% cov

O67572: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Aquifex aeolicus

36% id,
56% cov

LPXK_ARATH / Q8LEA0: Probable tetraacyldisaccharide 4'-kinase, mitochondrial; Protein LIPID X 4'-kinase; AtLpxK; EC 2.7.1.130 from Arabidopsis thaliana

34% id,
48% cov

N515DRAFT_2221: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

31% id,
95% cov

N515DRAFT_1919: fructokinase
is similar to:
PaperBLAST

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

30% id,
85% cov

N515DRAFT_0916: Sugar or nucleoside kinase, ribokinase family
is similar to:
PaperBLAST

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

30% id,
82% cov

N515DRAFT_0977: transcriptional regulator, TetR family
is similar to:
PaperBLAST

Q9EVJ6: macrolide 2'-kinase (EC 2.7.1.136) from Escherichia coli

29% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory