Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 28 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3101: ribokinase is similar to:	PaperBLAST
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli	46% id, 97% cov
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	45% id, 99% cov
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis	45% id, 97% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	43% id, 99% cov
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae	44% id, 98% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	43% id, 99% cov
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae	43% id, 99% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	43% id, 92% cov
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti	39% id, 100% cov
BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	40% id, 96% cov
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum	40% id, 94% cov
RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe	38% id, 97% cov
RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens Q9H477: ribokinase (EC 2.7.1.15) from Homo sapiens	38% id, 95% cov
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila	38% id, 95% cov
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans	38% id, 92% cov
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major	37% id, 94% cov
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus	34% id, 98% cov
RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae	31% id, 99% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	35% id, 79% cov
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	39% id, 55% cov
More...

N515DRAFT_3220: ribokinase is similar to:	PaperBLAST
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	41% id, 99% cov
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae	40% id, 99% cov
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti	41% id, 97% cov
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli	40% id, 97% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	38% id, 100% cov
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis	39% id, 97% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	37% id, 100% cov
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae	38% id, 97% cov
BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	38% id, 96% cov
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum	36% id, 94% cov
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila	35% id, 97% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	36% id, 92% cov
RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe	34% id, 97% cov
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major	34% id, 92% cov
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus	31% id, 100% cov
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans	33% id, 95% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	35% id, 80% cov
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	33% id, 58% cov
RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae	40% id, 26% cov
More...

N515DRAFT_0916: Sugar or nucleoside kinase, ribokinase family is similar to:	PaperBLAST
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	30% id, 99% cov
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae	29% id, 99% cov
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae	29% id, 99% cov
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	29% id, 99% cov
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti	27% id, 100% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	27% id, 93% cov
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum	28% id, 86% cov
RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe	25% id, 96% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	29% id, 80% cov
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major	25% id, 90% cov
More...

N515DRAFT_1919: fructokinase is similar to:	PaperBLAST
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	28% id, 99% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	27% id, 99% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	26% id, 100% cov
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus	28% id, 87% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	25% id, 83% cov
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	24% id, 49% cov
More...

N515DRAFT_2221: 2-dehydro-3-deoxygluconokinase is similar to:	PaperBLAST
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae	32% id, 84% cov
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum	30% id, 90% cov
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila	30% id, 89% cov
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	30% id, 84% cov
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans	29% id, 87% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	29% id, 86% cov
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major	26% id, 84% cov
RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens Q9H477: ribokinase (EC 2.7.1.15) from Homo sapiens	25% id, 89% cov
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	29% id, 49% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	36% id, 39% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	31% id, 30% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	35% id, 25% cov
More...

N515DRAFT_0917: tagatose 6-phosphate kinase is similar to:	PaperBLAST
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae	25% id, 91% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	23% id, 86% cov
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis	29% id, 40% cov
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli	28% id, 41% cov
More...

N515DRAFT_2099: ribose-5-phosphate isomerase is similar to:	PaperBLAST
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	34% id, 40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory