Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 97 curated entries in PaperBLAST's database that match '2.7.1.17'.

These curated entries have 61 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3230: xylulokinase
is similar to:
PaperBLAST

XYLB_ECOLI / P09099: Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli
XylB / b3564: xylulokinase (EC 2.7.1.17) from Escherichia coli
xylB / GB|AAC76588.1: xylulokinase; EC 2.7.1.17 from Escherichia coli
xylB / P09099: xylulokinase (EC 2.7.1.17) from Escherichia coli

59% id,
99% cov

BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis

59% id,
99% cov

SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti

52% id,
100% cov

More...

N515DRAFT_2983: anhydro-N-acetylmuramic acid kinase
is similar to:
PaperBLAST

ANMK_PSEAE / Q9I5Q5: Anhydro-N-acetylmuramic acid kinase; AnhMurNAc kinase; EC 2.7.1.170 from Pseudomonas aeruginosa
anmK / Q9I5Q5: anhydro-N-acetylmuramic acid kinase monomer (EC 2.7.1.170) from Pseudomonas aeruginosa
Q9I5Q5: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Pseudomonas aeruginosa

52% id,
99% cov

ANMK_PSEPK / Q88QQ4: Anhydro-N-acetylmuramic acid kinase; AnhMurNAc kinase; EC 2.7.1.170 from Pseudomonas putida

51% id,
99% cov

ANMK_ECOLI / P77570: Anhydro-N-acetylmuramic acid kinase; AnhMurNAc kinase; EC 2.7.1.170 from Escherichia coli
YdhH / b1640: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Escherichia coli
anmK / P77570: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Escherichia coli
P77570: anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) from Escherichia coli

48% id,
98% cov

More...

N515DRAFT_1233: 2-keto-3-deoxygalactonate kinase (EC 2.7.1.58)
is similar to:
PaperBLAST

YidV / b3693: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178; EC 2.7.1.58) from Escherichia coli
dgoK / P31459: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178) from Escherichia coli

39% id,
100% cov

N515DRAFT_2221: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

KDGK_SACS2 / Q97U29: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxy-galactonokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; KDGal kinase; EC 2.7.1.178 from Saccharolobus solfataricus
kdgK / Q97U29: 2-dehydro-3-deoxyglucono/2-dehydro-3-deoxygalactonokinase monomer (EC 2.7.1.178) from Saccharolobus solfataricus
Q97U29: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178) from Saccharolobus solfataricus

29% id,
96% cov

N515DRAFT_1880: adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
is similar to:
PaperBLAST

Q8PVB2: L-threonine kinase (EC 2.7.1.177); threonine-phosphate decarboxylase (EC 4.1.1.81) from Methanosarcina mazei

28% id,
97% cov

N515DRAFT_1919: fructokinase
is similar to:
PaperBLAST

YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli
kdgK / P37647: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178) from Escherichia coli

27% id,
94% cov

kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii

26% id,
87% cov

N515DRAFT_3907: glycerol kinase
is similar to:
PaperBLAST

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

28% id,
91% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

25% id,
99% cov

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

28% id,
90% cov

More...

N515DRAFT_4393: Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain
is similar to:
PaperBLAST

RIFN_AMYMS / G0FS68: Kanosamine kinase; EC 2.7.1.179 from Amycolatopsis mediterranei
G0FS68: kanosamine kinase (EC 2.7.1.179) from Amycolatopsis mediterranei

31% id,
80% cov

rifN / O52554: kanosamine 6-kinase (EC 2.7.1.179) from Amycolatopsis mediterranei

32% id,
76% cov

N515DRAFT_3101: ribokinase
is similar to:
PaperBLAST

D4GR05: 6-phosphofructokinase (EC 2.7.1.11); 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) from Haloferax volcanii

27% id,
91% cov

KDGK1_HALVD / D4GSE6: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxygluconate/2-keto-3-deoxygalactonate kinase; KDG kinase; KDGK-1; EC 2.7.1.178 from Haloferax volcanii
D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

26% id,
91% cov

N515DRAFT_0916: Sugar or nucleoside kinase, ribokinase family
is similar to:
PaperBLAST

kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii

24% id,
96% cov

N515DRAFT_2186: alanine-synthesizing transaminase
is similar to:
PaperBLAST

MmCobD / Q8PVB1: MmCobD (EC 4.1.1.81; EC 2.7.1.177) from Methanosarcina mazei

29% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

248446-250704 (frame -2) on N515DRAFT_scaffold00002.2
is similar to:
PaperBLAST

Q8PVB2: L-threonine kinase (EC 2.7.1.177); threonine-phosphate decarboxylase (EC 4.1.1.81) from Methanosarcina mazei
Also see hits to annotated proteins above

27% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory