Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 37 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_4210: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

39% id,
96% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

34% id,
99% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

30% id,
98% cov

N515DRAFT_0393: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

38% id,
96% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

35% id,
98% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

32% id,
97% cov

N515DRAFT_0593: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

35% id,
98% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

35% id,
97% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

32% id,
97% cov

N515DRAFT_1256: glucokinase
is similar to:
PaperBLAST

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

31% id,
98% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

32% id,
96% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

29% id,
98% cov

N515DRAFT_2652: glucokinase
is similar to:
PaperBLAST

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

32% id,
96% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

30% id,
96% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

29% id,
96% cov

N515DRAFT_1626: transcriptional regulator
is similar to:
PaperBLAST

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

27% id,
97% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

23% id,
97% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

23% id,
97% cov

More...

N515DRAFT_4393: Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain
is similar to:
PaperBLAST

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

27% id,
93% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

27% id,
93% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Bacillus megaterium

30% id,
78% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory