Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 36 curated entries in PaperBLAST's database that match '2.7.1.30' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3907: glycerol kinase
is similar to:
PaperBLAST

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

71% id,
99% cov

GLPK_THEAQ / Q9WX53: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus aquaticus

71% id,
99% cov

GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis

62% id,
99% cov

More...

N515DRAFT_3230: xylulokinase
is similar to:
PaperBLAST

Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens

26% id,
87% cov

N515DRAFT_2974: RHS repeat-associated core domain-containing protein
is similar to:
PaperBLAST

GLPK2_HUMAN / Q14410: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Homo sapiens

42% id,
7% cov

GLPK_HALVD / D4GYI5: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii

40% id,
7% cov

N515DRAFT_0654: RHS repeat-associated core domain-containing protein
is similar to:
PaperBLAST

GLPK2_HUMAN / Q14410: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Homo sapiens

42% id,
7% cov

GLPK_HALVD / D4GYI5: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii

40% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

312260-315004 (frame +2) on N515DRAFT_scaffold00004.4
is similar to:
PaperBLAST

Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens
Also see hits to annotated proteins above

26% id,
89% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory