Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 143 curated entries in PaperBLAST's database that match '3.1.3.3'.

These curated entries have 115 distinct sequences.

Running ublast with E ≤ 0.01

Found 19 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3581: D-3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

52% id,
64% cov

N515DRAFT_0640: putative hydrolase of the HAD superfamily
is similar to:
PaperBLAST

PSP_THET2 / Q72H00: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Thermus thermophilus

32% id,
96% cov

PSP_BACSU / P94512: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Bacillus subtilis

28% id,
43% cov

N515DRAFT_3452: acid phosphatase
is similar to:
PaperBLAST

O08351: nucleotidase (EC 3.1.3.31) from Elizabethkingia meningoseptica

33% id,
87% cov

N515DRAFT_2903: cell division protease FtsH
is similar to:
PaperBLAST

D4GUJ7: nucleotidase (EC 3.1.3.31); proteasome ATPase (EC 5.6.1.5) from Haloferax volcanii

44% id,
63% cov

N515DRAFT_1875: alpha-ribazole phosphatase
is similar to:
PaperBLAST

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

33% id,
78% cov

PSPB_HYDTT / D3DFP8: Putative phosphoserine phosphatase 2; PSP 2; PSPase 2; Metal-independent phosphoserine phosphatase 2; iPSP2; O-phosphoserine phosphohydrolase 2; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFP8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

28% id,
89% cov

PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFG8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

27% id,
75% cov

N515DRAFT_3064: fructose-1,6-bisphosphatase I
is similar to:
PaperBLAST

A8DUA7: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Morus alba

30% id,
75% cov

P46284: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii

27% id,
77% cov

N515DRAFT_4118: phosphoglycerate mutase (EC 5.4.2.1)
is similar to:
PaperBLAST

PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFG8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

28% id,
78% cov

SHB17_YEAST / P36136: Sedoheptulose 1,7-bisphosphatase; EC 3.1.3.37 from Saccharomyces cerevisiae

23% id,
77% cov

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

34% id,
50% cov

N515DRAFT_3045: AAA+-type ATPase, SpoVK/Ycf46/Vps4 family
is similar to:
PaperBLAST

D4GUJ7: nucleotidase (EC 3.1.3.31); proteasome ATPase (EC 5.6.1.5) from Haloferax volcanii

28% id,
68% cov

N515DRAFT_0084: 2-haloacid dehalogenase
is similar to:
PaperBLAST

PSP_THET2 / Q72H00: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Thermus thermophilus

32% id,
57% cov

N515DRAFT_0975: sigma-B regulation protein RsbU (phosphoserine phosphatase)
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis

31% id,
56% cov

N515DRAFT_2265: ATPases of the AAA+ class
is similar to:
PaperBLAST

D4GUJ7: nucleotidase (EC 3.1.3.31); proteasome ATPase (EC 5.6.1.5) from Haloferax volcanii

31% id,
54% cov

N515DRAFT_3107: ATP-dependent HslUV protease ATP-binding subunit HslU
is similar to:
PaperBLAST

D4GUJ7: nucleotidase (EC 3.1.3.31); proteasome ATPase (EC 5.6.1.5) from Haloferax volcanii

28% id,
47% cov

N515DRAFT_0108: gluconate 2-dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

27% id,
47% cov

N515DRAFT_3947: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase)
is similar to:
PaperBLAST

SERB_RHOFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Rhodoferax ferrireducens

39% id,
29% cov

N515DRAFT_2935: imidazoleglycerol-phosphate dehydratase
is similar to:
PaperBLAST

PNKP_MOUSE / Q9JLV6: Bifunctional polynucleotide phosphatase/kinase; DNA 5'-kinase/3'-phosphatase; Polynucleotide kinase-3'-phosphatase; EC 3.1.3.32; EC 2.7.1.78 from Mus musculus

33% id,
24% cov

N515DRAFT_1864: Holliday junction DNA helicase subunit RuvB
is similar to:
PaperBLAST

D4GUJ7: nucleotidase (EC 3.1.3.31); proteasome ATPase (EC 5.6.1.5) from Haloferax volcanii

35% id,
17% cov

N515DRAFT_3759: transcriptional regulator, TraR/DksA family
is similar to:
PaperBLAST

SYNJ1_HUMAN / O43426: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Homo sapiens
SYNJ1 / O43426: synaptojanin 1 (EC 3.1.3.56; EC 3.1.3.86; EC 3.1.3.36) from Homo sapiens

26% id,
12% cov

N515DRAFT_3465: RHS repeat-associated core domain-containing protein
is similar to:
PaperBLAST

SYNJ1_BOVIN / O18964: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; p150; EC 3.1.3.36 from Bos taurus

31% id,
9% cov

SYNJ1_MOUSE / Q8CHC4: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Mus musculus

27% id,
8% cov

SYNJ1_RAT / Q62910: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Rattus norvegicus

30% id,
7% cov

More...

N515DRAFT_3541: Signal transducer regulating beta-lactamase production, contains metallopeptidase domain
is similar to:
PaperBLAST

SYNJ1_HUMAN / O43426: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Homo sapiens
SYNJ1 / O43426: synaptojanin 1 (EC 3.1.3.56; EC 3.1.3.86; EC 3.1.3.36) from Homo sapiens

29% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

94647-95726 (frame +3) on N515DRAFT_scaffold00004.4
is similar to:
PaperBLAST

P46284: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii
Also see hits to annotated proteins above

27% id,
83% cov

70404-71783 (frame +3) on N515DRAFT_scaffold00002.2
is similar to:
PaperBLAST

SYNJ1_BOVIN / O18964: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; p150; EC 3.1.3.36 from Bos taurus
Also see hits to annotated proteins above

27% id,
15% cov

SYNJ1_MOUSE / Q8CHC4: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Mus musculus
Also see hits to annotated proteins above

27% id,
11% cov

SYNJ1_RAT / Q62910: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Rattus norvegicus
Also see hits to annotated proteins above

28% id,
10% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory