Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 163 curated entries in PaperBLAST's database that match '3.5.3.1'.

These curated entries have 116 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_0348: arginase
is similar to:
PaperBLAST

N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica

100% id,
100% cov

Ac3H11_701: Arginase (EC 3.5.3.1) from Acidovorax sp.

74% id,
83% cov

ARGI_BACCD / P53608: Arginase; EC 3.5.3.1 from Bacillus caldovelox
P53608: arginase (EC 3.5.3.1) from [Bacillus] caldovelox

44% id,
100% cov

More...

N515DRAFT_0145: formimidoylglutamate deiminase
is similar to:
PaperBLAST

HUTF_PSEAE / Q9HU77: Formimidoylglutamate deiminase; Formiminoglutamate deiminase; N-formimino-L-glutamate deiminase; N-formimino-L-glutamate iminohydrolase; EC 3.5.3.13 from Pseudomonas aeruginosa
Q9HU77: formimidoylglutamate deiminase (EC 3.5.3.13); formimidoylglutamase (EC 3.5.3.8) from Pseudomonas aeruginosa

55% id,
98% cov

AO356_09645: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

53% id,
99% cov

Pf6N2E2_3808: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

52% id,
99% cov

More...

N515DRAFT_1539: Agmatine/peptidylarginine deiminase
is similar to:
PaperBLAST

aguA / O24890: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori

38% id,
99% cov

Q9ZN18: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori

38% id,
99% cov

A0A0H2Z8C6: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

37% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory