Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 18 curated entries in PaperBLAST's database that match '3.5.3.12' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_1539: Agmatine/peptidylarginine deiminase
is similar to:
PaperBLAST

aguA / O24890: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori

38% id,
99% cov

Q9ZN18: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori

38% id,
99% cov

A0A0H2Z8C6: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

37% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory