Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 4 curated entries in PaperBLAST's database that match '3.5.99.5' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3727: 2-aminomuconate deaminase
is similar to:
PaperBLAST

AMND_PSESP / Q9KWS2: 2-aminomuconate deaminase; EC 3.5.99.5 from Pseudomonas sp.
amnD / Q9KWS2: 2-aminomuconate deaminase monomer (EC 3.5.99.5) from Pseudomonas sp.

41% id,
87% cov

nbaF / Q83V27: 2-aminomuconate deaminase (EC 3.5.99.5) from Pseudomonas fluorescens

39% id,
87% cov

N515DRAFT_4323: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC 6.3.5.-)
is similar to:
PaperBLAST

CNBH_COMTE / Q38M35: 2-amino-5-chloromuconic acid deaminase; 2-aminomuconate deaminase; EC 3.5.99.5 from Comamonas testosteroni

32% id,
88% cov

N515DRAFT_2224: reactive intermediate/imine deaminase
is similar to:
PaperBLAST

AMND_PSESP / Q9KWS2: 2-aminomuconate deaminase; EC 3.5.99.5 from Pseudomonas sp.
amnD / Q9KWS2: 2-aminomuconate deaminase monomer (EC 3.5.99.5) from Pseudomonas sp.

29% id,
91% cov

N515DRAFT_2068: reactive intermediate/imine deaminase
is similar to:
PaperBLAST

AMND_PSESP / Q9KWS2: 2-aminomuconate deaminase; EC 3.5.99.5 from Pseudomonas sp.
amnD / Q9KWS2: 2-aminomuconate deaminase monomer (EC 3.5.99.5) from Pseudomonas sp.

32% id,
76% cov

N515DRAFT_0701: amidase
is similar to:
PaperBLAST

CNBH_COMTE / Q38M35: 2-amino-5-chloromuconic acid deaminase; 2-aminomuconate deaminase; EC 3.5.99.5 from Comamonas testosteroni

31% id,
64% cov

N515DRAFT_2383: reactive intermediate/imine deaminase
is similar to:
PaperBLAST

AMND_PSESP / Q9KWS2: 2-aminomuconate deaminase; EC 3.5.99.5 from Pseudomonas sp.
amnD / Q9KWS2: 2-aminomuconate deaminase monomer (EC 3.5.99.5) from Pseudomonas sp.

23% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory