Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 65 curated entries in PaperBLAST's database that match '3.7.1.2'.

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_1252: 2,4-diketo-3-deoxy-L-fuconate hydrolase
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

64% id,
99% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

59% id,
99% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

59% id,
99% cov

More...

N515DRAFT_0362: fumarylacetoacetate (FAA) hydrolase
is similar to:
PaperBLAST

Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) from Pseudomonas stutzeri

60% id,
98% cov

SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis

55% id,
99% cov

N515DRAFT_2045: fumarylpyruvate hydrolase
is similar to:
PaperBLAST

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

57% id,
94% cov

A0A080VH08: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Pseudomonas aeruginosa

49% id,
98% cov

naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.

49% id,
93% cov

More...

N515DRAFT_0567: acetolactate synthase, large subunit
is similar to:
PaperBLAST

SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti

26% id,
93% cov

PGA1_c07250: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Phaeobacter inhibens

24% id,
90% cov

HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae

25% id,
79% cov

N515DRAFT_0378: acetolactate synthase, large subunit (EC 2.2.1.6)
is similar to:
PaperBLAST

HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae

25% id,
92% cov

AO356_23185: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens

24% id,
90% cov

PGA1_c07250: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Phaeobacter inhibens

24% id,
87% cov

More...

N515DRAFT_1567: pyruvate dehydrogenase (quinone)
is similar to:
PaperBLAST

SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti

23% id,
94% cov

N515DRAFT_3481: Pimeloyl-ACP methyl ester carboxylesterase
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

32% id,
47% cov

N515DRAFT_3239: Pimeloyl-ACP methyl ester carboxylesterase
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

36% id,
38% cov

N515DRAFT_3983: Pimeloyl-ACP methyl ester carboxylesterase
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

32% id,
38% cov

N515DRAFT_4142: Pimeloyl-ACP methyl ester carboxylesterase
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

32% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory