Curated BLAST for Genomes


Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 21 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_2292: 4-hydroxy-2-oxoheptanedioate aldolase
is similar to:

Q47098: 4-hydroxy-2-oxoheptanedioate aldolase (EC; 4-hydroxy-2-oxovalerate aldolase (EC from Escherichia coli

30% id,
91% cov

N515DRAFT_0574: 2-isopropylmalate synthase
is similar to:

HOA_THET8 / Q53WI0: 4-hydroxy-2-oxovalerate aldolase; HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxohexanoate aldolase; 4-hydroxy-2-oxopentanoate aldolase; EC; EC from Thermus thermophilus

28% id,
74% cov

HOA_STRTE / Q9X9Q0: 4-hydroxy-2-oxovalerate aldolase; HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase; EC from Streptomyces tendae

29% id,
73% cov

P51017: 4-hydroxy-2-oxovalerate aldolase (EC from Pseudomonas putida

27% id,
77% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory