Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)
Found 53 curated entries in PaperBLAST's database that match '4.2.1.12'.
These curated entries have 33 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query
| N515DRAFT_0115: tryptophan synthase beta chain is similar to: | PaperBLAST |
trpB / Q9YGB0: tryptophan synthase β subunit (EC 4.2.1.122) from Thermococcus kodakarensis | 64% id, 98% cov |
trpB1 / P50909: β subunit of tryptophan synthase (EC 4.2.1.122) from Thermotoga maritima | 60% id, 97% cov |
TrpB / b1261: tryptophan synthase subunit β (EC 4.2.1.122) from Escherichia coli | 56% id, 95% cov |
| N515DRAFT_3177: 6-phosphogluconate dehydratase is similar to: | PaperBLAST |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 63% id, 99% cov |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 60% id, 99% cov |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 60% id, 98% cov |
| N515DRAFT_0569: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 29% id, 87% cov |
| N515DRAFT_2409: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 30% id, 82% cov |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 29% id, 83% cov |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 27% id, 84% cov |
| N515DRAFT_3946: arabinose-5-phosphate isomerase is similar to: | PaperBLAST |
P44862: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Haemophilus influenzae | 21% id, 87% cov |
G8UQI0: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Tannerella forsythia | 27% id, 58% cov |
| N515DRAFT_0116: tryptophan synthase, alpha chain is similar to: | PaperBLAST |
A0A2U8JPY3: tryptophan synthase (indole-salvaging) (EC 4.2.1.122); tryptophan synthase (EC 4.2.1.20) from Psilocybe cubensis | 40% id, 34% cov |
| N515DRAFT_0590: glutamine--fructose-6-phosphate transaminase is similar to: | PaperBLAST |
P44862: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Haemophilus influenzae | 32% id, 24% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory