Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.150'.

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_1164: enoyl-CoA hydratase
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

49% id,
100% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

46% id,
100% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

45% id,
99% cov

More...

N515DRAFT_0930: methylglutaconyl-CoA hydratase
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

32% id,
98% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

31% id,
95% cov

N515DRAFT_0416: 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

36% id,
78% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

35% id,
79% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

32% id,
80% cov

More...

N515DRAFT_2687: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

29% id,
80% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

29% id,
77% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

29% id,
74% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory