Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)
Found 52 curated entries in PaperBLAST's database that match '4.2.1.6'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query
| N515DRAFT_1251: L-fuconate dehydratase is similar to: | PaperBLAST |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 76% id, 98% cov |
HSERO_RS05235: L-fuconate dehydratase (EC 4.2.1.68) from Herbaspirillum seropedicae | 57% id, 99% cov |
G3Y683: L-fuconate dehydratase (EC 4.2.1.68) from Aspergillus niger | 51% id, 99% cov |
| N515DRAFT_1231: galactonate dehydratase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 73% id, 100% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 61% id, 100% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 51% id, 100% cov |
| N515DRAFT_2409: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 65% id, 99% cov |
| N515DRAFT_0569: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 33% id, 94% cov |
| N515DRAFT_3177: 6-phosphogluconate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 30% id, 94% cov |
| N515DRAFT_0727: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase is similar to: | PaperBLAST |
fabZ: beta-hydroxyacyl-acyl carrier protein dehydratase; EC 4.2.1.60 from Toxoplasma gondii | 45% id, 57% cov |
| N515DRAFT_2119: o-succinylbenzoate synthase is similar to: | PaperBLAST |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 22% id, 88% cov |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 28% id, 38% cov |
ENOF1_HUMAN / Q7L5Y1: Mitochondrial enolase superfamily member 1; Antisense RNA to thymidylate synthase; rTS; L-fuconate dehydratase; EC 4.2.1.68 from Homo sapiens | 24% id, 37% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 48912-49523 (frame -1) on N515DRAFT_scaffold00001.1 is similar to: | PaperBLAST |
fabZ: beta-hydroxyacyl-acyl carrier protein dehydratase; EC 4.2.1.60 from Toxoplasma gondii | 42% id, 68% cov |
Lawrence Berkeley National Laboratory