Curated BLAST for Genomes


Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_1631: alanine dehydrogenase
is similar to:

OCD_PSEPK / Q88H32: Ornithine cyclodeaminase; OCD; EC from Pseudomonas putida
Q88H32: ornithine cyclodeaminase (EC from Pseudomonas putida

23% id,
85% cov

OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC from Agrobacterium fabrum
arcB / P09773: ornithine cyclodeaminase (EC from Agrobacterium fabrum

29% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory