Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 82 curated entries in PaperBLAST's database that match '4.3.1.2'.

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_2941: histidine ammonia-lyase is similar to:	PaperBLAST
TALY_CERS4 / Q3IWB0: Tyrosine ammonia-lyase; EC 4.3.1.23 from Cereibacter sphaeroides Q3IWB0: tyrosine ammonia-lyase (EC 4.3.1.23) from Cereibacter sphaeroides	32% id, 88% cov
TAM_MYXFU / B8ZV93: Tyrosine 2,3-aminomutase; MfTAM; Tyrosine ammonia-lyase; EC 5.4.3.6; EC 4.3.1.23 from Myxococcus fulvus	42% id, 48% cov
TAM_MYXSM / B8ZV94: Tyrosine 2,3-aminomutase; MxTAM; Tyrosine ammonia-lyase; EC 5.4.3.6; EC 4.3.1.23 from Myxococcus sp.	42% id, 48% cov
TAM_CHOCO / Q0VZ68: Tyrosine 2,3-aminomutase; Tyrosine ammonia-lyase; EC 5.4.3.6; EC 4.3.1.23 from Chondromyces crocatus	37% id, 52% cov
TALY_CUPMC / Q1LRV9: Tyrosine ammonia-lyase; CmTAL; Tyrosine 2,3-aminomutase; EC 4.3.1.23; EC 5.4.3.6 from Cupriavidus metallidurans	37% id, 53% cov
encP / Q9KHJ9: phenylalanine ammonia lyase (EC 4.3.1.25) from Streptomyces maritimus	37% id, 50% cov
Q54JI7: phenylalanine ammonia-lyase (EC 4.3.1.24) from Dictyostelium discoideum	32% id, 58% cov
TAM_STRGL / Q8GMG0: MIO-dependent tyrosine 2,3-aminomutase; Tyrosine ammonia-lyase; EC 5.4.3.6; EC 4.3.1.23 from Streptomyces globisporus	35% id, 51% cov
PAL_NOSP7 / B2J528: Phenylalanine ammonia-lyase; EC 4.3.1.24 from Nostoc punctiforme	35% id, 47% cov
PAL_TRIV2 / Q3M5Z3: Phenylalanine ammonia-lyase; EC 4.3.1.24 from Trichormus variabilis Q3M5Z3: phenylalanine ammonia-lyase (EC 4.3.1.24) from Trichormus variabilis	34% id, 48% cov
F0SIS6: phenylalanine ammonia-lyase (EC 4.3.1.24) from Rubinisphaera brasiliensis	33% id, 48% cov
Q68G83: phenylalanine ammonia-lyase (EC 4.3.1.24); phenylalanine aminomutase (L-beta-phenylalanine forming) (EC 5.4.3.10) from Taxus chinensis	34% id, 46% cov
PAM_TAXCH / Q68G84: Phenylalanine aminomutase (L-beta-phenylalanine forming); Phenylalanine ammonia-lyase; EC 5.4.3.10; EC 4.3.1.24 from Taxus chinensis	34% id, 46% cov
PAM_TAXCA / Q6GZ04: Phenylalanine aminomutase (L-beta-phenylalanine forming); Phenylalanine ammonia-lyase; EC 5.4.3.10; EC 4.3.1.24 from Taxus canadensis	34% id, 45% cov
Q54JI7: phenylalanine ammonia-lyase (EC 4.3.1.24) from Dictyostelium discoideum	45% id, 34% cov
PALY_TRIMT / X2BTY5: Phenylalanine ammonia-lyase; TmPAL; EC 4.3.1.24 from Tricholoma matsutake	36% id, 41% cov
PALY1_PLEOS / A0A4Y6HUI7: Phenylalanine ammonia-lyase 1; PoPAL1; EC 4.3.1.24 from Pleurotus ostreatus	38% id, 39% cov
U5TV35: tyrosine ammonia-lyase (EC 4.3.1.23) from Rhodotorula glutinis	36% id, 40% cov
TALY_CUPMC / Q1LRV9: Tyrosine ammonia-lyase; CmTAL; Tyrosine 2,3-aminomutase; EC 4.3.1.23; EC 5.4.3.6 from Cupriavidus metallidurans	41% id, 35% cov
P45733: phenylalanine ammonia-lyase (EC 4.3.1.24) from Nicotiana tabacum	33% id, 44% cov
STR11_STRTC / A0A384XHA3: Phenylalanine ammonia-lyase str11; PAL; Strobilurin biosynthesis cluster protein r11; EC 4.3.1.24 from Strobilurus tenacellus	35% id, 40% cov
PALY_RHOTO / P11544: Phenylalanine/tyrosine ammonia-lyase; Bifunctional phenylalanine ammonia-lyase; Bifunctional PAL; EC 4.3.1.25 from Rhodotorula toruloides P11544: phenylalanine ammonia-lyase (EC 4.3.1.24); phenylalanine/tyrosine ammonia-lyase (EC 4.3.1.25) from Rhodotorula toruloides	36% id, 39% cov
PALY2_PLEOS / A0A4Y6HUD7: Phenylalanine ammonia-lyase 2; PoPAL2; EC 4.3.1.24 from Pleurotus ostreatus	34% id, 42% cov
TAM_STRGL / Q8GMG0: MIO-dependent tyrosine 2,3-aminomutase; Tyrosine ammonia-lyase; EC 5.4.3.6; EC 4.3.1.23 from Streptomyces globisporus	39% id, 37% cov
L0BXX7: phenylalanine ammonia-lyase (EC 4.3.1.24) from Plectranthus scutellarioides	32% id, 44% cov
PAL2_NARPS / A0A2H5AIY6: Phenylalanine ammonia-lyase 2; EC 4.3.1.24 from Narcissus pseudonarcissus	31% id, 45% cov
PAL3_ARATH / P45725: Phenylalanine ammonia-lyase 3; EC 4.3.1.24 from Arabidopsis thaliana	31% id, 45% cov
P35513: phenylalanine ammonia-lyase (EC 4.3.1.24) from Nicotiana tabacum	32% id, 44% cov
C6ZIA5: phenylalanine ammonia-lyase (EC 4.3.1.24) from Nicotiana tabacum	32% id, 44% cov
PAL1_NARPS / A0A2H5AIW0: Phenylalanine ammonia-lyase 1; EC 4.3.1.24 from Narcissus pseudonarcissus	32% id, 44% cov
PAL1_TOBAC / P25872: Phenylalanine ammonia-lyase; EC 4.3.1.24 from Nicotiana tabacum P25872: phenylalanine ammonia-lyase (EC 4.3.1.24) from Nicotiana tabacum	32% id, 44% cov
C5XXT8: phenylalanine/tyrosine ammonia-lyase (EC 4.3.1.25) from Sorghum bicolor	31% id, 44% cov
D3Y5L6: phenylalanine ammonia-lyase (EC 4.3.1.24) from Cistanche deserticola	31% id, 44% cov
B9VU66: phenylalanine ammonia-lyase (EC 4.3.1.24) from Lycoris radiata	31% id, 44% cov
TAM_MYXFU / B8ZV93: Tyrosine 2,3-aminomutase; MfTAM; Tyrosine ammonia-lyase; EC 5.4.3.6; EC 4.3.1.23 from Myxococcus fulvus	32% id, 43% cov
TAM_MYXSM / B8ZV94: Tyrosine 2,3-aminomutase; MxTAM; Tyrosine ammonia-lyase; EC 5.4.3.6; EC 4.3.1.23 from Myxococcus sp.	32% id, 43% cov
C5XXT9: phenylalanine ammonia-lyase (EC 4.3.1.24) from Sorghum bicolor	32% id, 44% cov
PAL1_PETHY / Q50EX7: Phenylalanine ammonia-lyase 1; PhPAL1; EC 4.3.1.24 from Petunia hybrida	32% id, 44% cov
Q6ST23: phenylalanine ammonia-lyase (EC 4.3.1.24) from Bambusa oldhamii	32% id, 44% cov
Q5EIB6: phenylalanine ammonia-lyase (EC 4.3.1.24) from Rhodiola sachalinensis	31% id, 44% cov
Q52QH3: phenylalanine ammonia-lyase (EC 4.3.1.24) from Astragalus mongholicus	31% id, 44% cov
PALY_FLAVE / A0A0A7AAW9: Phenylalanine ammonia-lyase; FvPAL; EC 4.3.1.24 from Flammulina velutipes	34% id, 40% cov
D5KS97: phenylalanine ammonia-lyase (EC 4.3.1.24); phenylalanine/tyrosine ammonia-lyase (EC 4.3.1.25) from Bambusa oldhamii	31% id, 45% cov
A9XIW5: phenylalanine ammonia-lyase (EC 4.3.1.24) from Salvia miltiorrhiza	31% id, 44% cov
PALY_MAIZE / Q8VXG7: Phenylalanine/tyrosine ammonia-lyase; Bifunctional phenylalanine ammonia-lyase; Bifunctional PAL; EC 4.3.1.25 from Zea mays Q8VXG7: phenylalanine ammonia-lyase (EC 4.3.1.24) from Zea mays	31% id, 45% cov
HKM12_ASPHA / P0DUM0: Phenylalanine ammonia-lyase hkm12; PAL; Hancockiamides biosynthesis cluster protein 12; EC 4.3.1.24 from Aspergillus hancockii	30% id, 46% cov
Q852S1: phenylalanine ammonia-lyase (EC 4.3.1.24) from Daucus carota	31% id, 44% cov
C0LL35: phenylalanine ammonia-lyase (EC 4.3.1.24) from Bambusa oldhamii	31% id, 44% cov
C0HJ40: phenylalanine ammonia-lyase (EC 4.3.1.24) from Zea mays	31% id, 43% cov
P35511: phenylalanine ammonia-lyase (EC 4.3.1.24) from Solanum lycopersicum	30% id, 45% cov
CLZ10_COCLU / A0A345BJN1: Phenylalanine ammonia-lyase; PAL; Squalestatin S1 biosynthesis cluster protein clz10; Zaragozic acid A biosynthesis cluster protein 10; EC 4.3.1.24 from Cochliobolus lunatus	34% id, 40% cov
PAL1_PETCR / P24481: Phenylalanine ammonia-lyase 1; EC 4.3.1.24 from Petroselinum crispum	31% id, 43% cov
Q0GA81: phenylalanine ammonia-lyase (EC 4.3.1.24) from Jatropha curcas	31% id, 44% cov
D0E576: phenylalanine ammonia-lyase (EC 4.3.1.24) from Avena sativa	30% id, 44% cov
PAL1 / B5U983: phenylalanine ammonia-lyase 1 (EC 4.3.1.25) from Ephedra sinica B5U983: phenylalanine ammonia-lyase (EC 4.3.1.24) from Ephedra sinica	35% id, 39% cov
PAL2_ARATH / P45724: Phenylalanine ammonia-lyase 2; EC 4.3.1.24 from Arabidopsis thaliana	31% id, 44% cov
PAL4_ARATH / Q9SS45: Phenylalanine ammonia-lyase 4; EC 4.3.1.24 from Arabidopsis thaliana	30% id, 44% cov
MFM7_PHOSM / A0A3G1DJK5: Phenylalanine ammonia-lyase; PAL; Squalestatin S1 biosynthesis cluster protein M7; EC 4.3.1.24 from Phoma sp.	33% id, 40% cov
B1GS31: phenylalanine ammonia-lyase (EC 4.3.1.24) from Cynara cardunculus	34% id, 39% cov
F8RL28: phenylalanine ammonia-lyase (EC 4.3.1.24) from Fragaria x	34% id, 38% cov
E3T9X0: phenylalanine ammonia-lyase (EC 4.3.1.24) from Allium sativum	29% id, 44% cov
PAL1_FRIUN / P0DO55: Phenylalanine/tyrosine ammonia-lyase 1; FuPAL1; EC 4.3.1.25 from Fritillaria unibracteata	34% id, 38% cov
PAL1_ARATH / P35510: Phenylalanine ammonia-lyase 1; EC 4.3.1.24 from Arabidopsis thaliana	30% id, 43% cov
C5YCD6: phenylalanine/tyrosine ammonia-lyase (EC 4.3.1.25) from Sorghum bicolor	32% id, 39% cov
Q672H7: phenylalanine ammonia-lyase (EC 4.3.1.24) from Camellia sinensis	32% id, 39% cov
P52777: phenylalanine ammonia-lyase (EC 4.3.1.24) from Pinus taeda	34% id, 37% cov
PAL_TRIV2 / Q3M5Z3: Phenylalanine ammonia-lyase; EC 4.3.1.24 from Trichormus variabilis Q3M5Z3: phenylalanine ammonia-lyase (EC 4.3.1.24) from Trichormus variabilis	28% id, 45% cov
encP / Q9KHJ9: phenylalanine ammonia lyase (EC 4.3.1.25) from Streptomyces maritimus	35% id, 34% cov
F0SIS6: phenylalanine ammonia-lyase (EC 4.3.1.24) from Rubinisphaera brasiliensis	30% id, 33% cov
PAL_NOSP7 / B2J528: Phenylalanine ammonia-lyase; EC 4.3.1.24 from Nostoc punctiforme	30% id, 32% cov
PAL1 / B5U983: phenylalanine ammonia-lyase 1 (EC 4.3.1.25) from Ephedra sinica B5U983: phenylalanine ammonia-lyase (EC 4.3.1.24) from Ephedra sinica	27% id, 28% cov
PALY2_PLEOS / A0A4Y6HUD7: Phenylalanine ammonia-lyase 2; PoPAL2; EC 4.3.1.24 from Pleurotus ostreatus	29% id, 25% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

623890-625863 (frame -2) on N515DRAFT_scaffold00003.3 is similar to:	PaperBLAST
TALY_CERS4 / Q3IWB0: Tyrosine ammonia-lyase; EC 4.3.1.23 from Cereibacter sphaeroides Q3IWB0: tyrosine ammonia-lyase (EC 4.3.1.23) from Cereibacter sphaeroides Also see hits to annotated proteins above	32% id, 90% cov
PAL_NOSP7 / B2J528: Phenylalanine ammonia-lyase; EC 4.3.1.24 from Nostoc punctiforme Also see hits to annotated proteins above	34% id, 50% cov
PAL_TRIV2 / Q3M5Z3: Phenylalanine ammonia-lyase; EC 4.3.1.24 from Trichormus variabilis Q3M5Z3: phenylalanine ammonia-lyase (EC 4.3.1.24) from Trichormus variabilis Also see hits to annotated proteins above	34% id, 50% cov
U5TV35: tyrosine ammonia-lyase (EC 4.3.1.23) from Rhodotorula glutinis Also see hits to annotated proteins above	35% id, 45% cov
PALY_RHOTO / P11544: Phenylalanine/tyrosine ammonia-lyase; Bifunctional phenylalanine ammonia-lyase; Bifunctional PAL; EC 4.3.1.25 from Rhodotorula toruloides P11544: phenylalanine ammonia-lyase (EC 4.3.1.24); phenylalanine/tyrosine ammonia-lyase (EC 4.3.1.25) from Rhodotorula toruloides Also see hits to annotated proteins above	35% id, 43% cov
C5XXT8: phenylalanine/tyrosine ammonia-lyase (EC 4.3.1.25) from Sorghum bicolor Also see hits to annotated proteins above	31% id, 48% cov
STR11_STRTC / A0A384XHA3: Phenylalanine ammonia-lyase str11; PAL; Strobilurin biosynthesis cluster protein r11; EC 4.3.1.24 from Strobilurus tenacellus Also see hits to annotated proteins above	34% id, 44% cov
PALY_MAIZE / Q8VXG7: Phenylalanine/tyrosine ammonia-lyase; Bifunctional phenylalanine ammonia-lyase; Bifunctional PAL; EC 4.3.1.25 from Zea mays Q8VXG7: phenylalanine ammonia-lyase (EC 4.3.1.24) from Zea mays Also see hits to annotated proteins above	31% id, 48% cov
D0E576: phenylalanine ammonia-lyase (EC 4.3.1.24) from Avena sativa Also see hits to annotated proteins above	30% id, 48% cov
PAL1_FRIUN / P0DO55: Phenylalanine/tyrosine ammonia-lyase 1; FuPAL1; EC 4.3.1.25 from Fritillaria unibracteata Also see hits to annotated proteins above	34% id, 42% cov
PALY_FLAVE / A0A0A7AAW9: Phenylalanine ammonia-lyase; FvPAL; EC 4.3.1.24 from Flammulina velutipes Also see hits to annotated proteins above	33% id, 42% cov
PAL1 / B5U983: phenylalanine ammonia-lyase 1 (EC 4.3.1.25) from Ephedra sinica B5U983: phenylalanine ammonia-lyase (EC 4.3.1.24) from Ephedra sinica Also see hits to annotated proteins above	34% id, 40% cov
P52777: phenylalanine ammonia-lyase (EC 4.3.1.24) from Pinus taeda Also see hits to annotated proteins above	33% id, 38% cov
More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory