Curated BLAST for Genomes


Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 23 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3229: D-xylose isomerase (EC
is similar to:

AO356_28500: Xylose isomerase (EC from Pseudomonas fluorescens

71% id,
100% cov

BPHYT_RS32825: Xylose isomerase (EC from Burkholderia phytofirmans

72% id,
100% cov

PS417_10945: Xylose isomerase (EC from Pseudomonas simiae

71% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory