Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_1920: Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family
is similar to:
PaperBLAST

MANI_MARM1 / F2JVT6: D-mannose isomerase; MI; EC 5.3.1.7 from Marinomonas mediterranea

55% id,
99% cov

BPHYT_RS02050: D-mannose isomerase (EC 5.3.1.7) from Burkholderia phytofirmans

60% id,
91% cov

Sama_0560: D-mannose isomerase (EC 5.3.1.7) from Shewanella amazonensis

53% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory