Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 18 curated entries in PaperBLAST's database that match '5.4.2.7'.

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_2990: phosphomannomutase / phosphoglucomutase
is similar to:
PaperBLAST

PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis
Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis

30% id,
64% cov

N515DRAFT_1372: phosphoglucosamine mutase
is similar to:
PaperBLAST

PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis
Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis

31% id,
58% cov

PGM2_MOUSE / Q7TSV4: Phosphoglucomutase-2; PGM 2; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphopentomutase; EC 5.4.2.2; EC 5.4.2.7 from Mus musculus

24% id,
66% cov

PGM2_HUMAN / Q96G03: Phosphoglucomutase-2; PGM 2; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphopentomutase; EC 5.4.2.2; EC 5.4.2.7 from Homo sapiens
PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens

25% id,
46% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory