Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 25 curated entries in PaperBLAST's database that match '6.2.1.17' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3075: acetyl-coenzyme A synthetase (EC 6.2.1.1)
is similar to:
PaperBLAST

AcsA / b4069: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.1; EC 6.2.1.17) from Escherichia coli
acs / P27550: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.17; EC 6.2.1.1) from Escherichia coli

64% id,
99% cov

acsA / P31638: acetyl-CoA synthetase (EC 6.2.1.1; EC 6.2.1.17) from Cupriavidus necator

54% id,
98% cov

ACSA_HUMAN / Q9NR19: Acetyl-coenzyme A synthetase, cytoplasmic; Acetate--CoA ligase; Acetyl-CoA synthetase; ACS; AceCS; Acetyl-CoA synthetase 1; AceCS1; Acyl-CoA synthetase short-chain family member 2; Acyl-activating enzyme; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens

54% id,
95% cov

More...

N515DRAFT_0016: propionyl-CoA synthetase
is similar to:
PaperBLAST

YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli
prpE / P77495: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli
P77495: propionate-CoA ligase (EC 6.2.1.17) from Escherichia coli

59% id,
100% cov

PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium
prpE / P55912: propionate-CoA ligase (EC 6.2.1.17) from Salmonella typhimurium

59% id,
100% cov

prpE / Q5LPB4: propionate--CoA ligase (EC 6.2.1.17) from Ruegeria pomeroyi

46% id,
99% cov

More...

N515DRAFT_2020: enterobactin synthetase component F
is similar to:
PaperBLAST

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

26% id,
86% cov

ACSA_MOUSE / Q9QXG4: Acetyl-coenzyme A synthetase, cytoplasmic; Acetate--CoA ligase; Acetyl-CoA synthetase; ACS; AceCS; Acetyl-CoA synthetase 1; AceCS1; Acyl-CoA synthetase short-chain family member 2; Acyl-activating enzyme; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Mus musculus

25% id,
52% cov

ACSA_HUMAN / Q9NR19: Acetyl-coenzyme A synthetase, cytoplasmic; Acetate--CoA ligase; Acetyl-CoA synthetase; ACS; AceCS; Acetyl-CoA synthetase 1; AceCS1; Acyl-CoA synthetase short-chain family member 2; Acyl-activating enzyme; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens

24% id,
52% cov

More...

N515DRAFT_1417: long-chain acyl-CoA synthetase
is similar to:
PaperBLAST

prpE / Q5LPB4: propionate--CoA ligase (EC 6.2.1.17) from Ruegeria pomeroyi

25% id,
87% cov

YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli
prpE / P77495: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli
P77495: propionate-CoA ligase (EC 6.2.1.17) from Escherichia coli

23% id,
86% cov

CCL4_HUMLU / M4IQQ5: 2-methylpropanoate--CoA ligase CCL4; HlCCL4; 2-methylbutanoate--CoA ligase CCL4; Butanoate--CoA ligase CCL3; Propionate--CoA ligase CCL3; EC 6.2.1.-; EC 6.2.1.17 from Humulus lupulus

30% id,
65% cov

More...

N515DRAFT_2436: amino acid adenylation domain-containing protein
is similar to:
PaperBLAST

prpE / Q5LPB4: propionate--CoA ligase (EC 6.2.1.17) from Ruegeria pomeroyi

23% id,
89% cov

AcsA / b4069: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.1; EC 6.2.1.17) from Escherichia coli
acs / P27550: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.17; EC 6.2.1.1) from Escherichia coli

25% id,
69% cov

ACS2L_HUMAN / Q9NUB1: Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens

26% id,
62% cov

More...

N515DRAFT_2437: amino acid adenylation domain-containing protein
is similar to:
PaperBLAST

ACS2L_HUMAN / Q9NUB1: Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens

25% id,
74% cov

ACS2L_MOUSE / Q99NB1: Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Mus musculus

24% id,
72% cov

acsA / P31638: acetyl-CoA synthetase (EC 6.2.1.1; EC 6.2.1.17) from Cupriavidus necator

26% id,
51% cov

More...

N515DRAFT_2435: amino acid adenylation domain-containing protein
is similar to:
PaperBLAST

acsA / P31638: acetyl-CoA synthetase (EC 6.2.1.1; EC 6.2.1.17) from Cupriavidus necator

28% id,
59% cov

AcsA / b4069: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.1; EC 6.2.1.17) from Escherichia coli
acs / P27550: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.17; EC 6.2.1.1) from Escherichia coli

20% id,
26% cov

A4YGR1: propionate-CoA ligase (EC 6.2.1.17); 3-hydroxypropionyl-CoA synthase (EC 6.2.1.36) from Metallosphaera sedula

29% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory