Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 7 curated entries in PaperBLAST's database that match '6.2.1.27' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3075: acetyl-coenzyme A synthetase (EC 6.2.1.1)
is similar to:
PaperBLAST

4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris
hbaA / Q53005: 4-hydroxybenzoate-CoA ligase subunit (EC 6.2.1.25; EC 6.2.1.27) from Rhodopseudomonas palustris

29% id,
97% cov

3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica
hcl / Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27) from Thauera aromatica
Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Thauera aromatica

28% id,
97% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

24% id,
90% cov

N515DRAFT_2435: amino acid adenylation domain-containing protein
is similar to:
PaperBLAST

3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica
hcl / Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27) from Thauera aromatica
Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Thauera aromatica

28% id,
98% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

22% id,
34% cov

N515DRAFT_1417: long-chain acyl-CoA synthetase
is similar to:
PaperBLAST

4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris
hbaA / Q53005: 4-hydroxybenzoate-CoA ligase subunit (EC 6.2.1.25; EC 6.2.1.27) from Rhodopseudomonas palustris

27% id,
95% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

32% id,
64% cov

N515DRAFT_2020: enterobactin synthetase component F
is similar to:
PaperBLAST

3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica
hcl / Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27) from Thauera aromatica
Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Thauera aromatica

27% id,
94% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

25% id,
90% cov

N515DRAFT_0016: propionyl-CoA synthetase
is similar to:
PaperBLAST

3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica
hcl / Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27) from Thauera aromatica
Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Thauera aromatica

26% id,
98% cov

N515DRAFT_2437: amino acid adenylation domain-containing protein
is similar to:
PaperBLAST

3HBCL_THAAR / Q9AJS8: 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase; 3-hydroxybenzoyl-CoA synthetase; EC 6.2.1.27; EC 6.2.1.37 from Thauera aromatica
hcl / Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27) from Thauera aromatica
Q9AJS8: 4-hydroxybenzoate-CoA ligase (EC 6.2.1.27); 3-hydroxybenzoate-CoA ligase (EC 6.2.1.37) from Thauera aromatica

24% id,
92% cov

4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris
hbaA / Q53005: 4-hydroxybenzoate-CoA ligase subunit (EC 6.2.1.25; EC 6.2.1.27) from Rhodopseudomonas palustris

26% id,
80% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

27% id,
57% cov

N515DRAFT_2436: amino acid adenylation domain-containing protein
is similar to:
PaperBLAST

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

24% id,
90% cov

N515DRAFT_4050: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
is similar to:
PaperBLAST

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

28% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

83173-87108 (frame -2) on N515DRAFT_scaffold00003.3
is similar to:
PaperBLAST

4HBCL_RHOPA / Q53005: 4-hydroxybenzoate--CoA/benzoate--CoA ligase; 4-hydroxybenzoyl-CoA synthetase; EC 6.2.1.25; EC 6.2.1.27 from Rhodopseudomonas palustris
hbaA / Q53005: 4-hydroxybenzoate-CoA ligase subunit (EC 6.2.1.25; EC 6.2.1.27) from Rhodopseudomonas palustris
Also see hits to annotated proteins above

27% id,
94% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory