Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 14 curated entries in PaperBLAST's database that match '6.3.1.11'.

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_3024: L-glutamine synthetase (EC 6.3.1.2)
is similar to:
PaperBLAST

PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli
YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli
puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli

23% id,
92% cov

BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis

23% id,
89% cov

AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

28% id,
73% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

52880-54370 (frame -3) on N515DRAFT_scaffold00004.4
is similar to:
PaperBLAST

BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis
Also see hits to annotated proteins above

23% id,
93% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory