Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 21 curated entries in PaperBLAST's database that match 'Glycine cleavage system H' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_4332: glycine cleavage system H protein
is similar to:
PaperBLAST

GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus

61% id,
98% cov

GCSH_ECOLI / P0A6T9: Glycine cleavage system H protein from Escherichia coli
Gcv / b2904: glycine cleavage system H protein from Escherichia coli
gcvH / P0A6T9: glycine cleavage system H protein from Escherichia coli

58% id,
100% cov

gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp.

47% id,
98% cov

More...

N515DRAFT_2156: pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
is similar to:
PaperBLAST

GCSH3_ARATH / Q9LQL0: Glycine cleavage system H protein 3, mitochondrial from Arabidopsis thaliana

31% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory