Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 1 curated entries in PaperBLAST's database that match 'N-acetyl-LL-diaminopimelate aminotransferase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_1410: methionine aminotransferase
is similar to:
PaperBLAST

DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis

31% id,
91% cov

N515DRAFT_2186: alanine-synthesizing transaminase
is similar to:
PaperBLAST

DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis

29% id,
98% cov

N515DRAFT_0006: aspartate aminotransferase
is similar to:
PaperBLAST

DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis

29% id,
95% cov

N515DRAFT_1217: transcriptional regulator, GntR family
is similar to:
PaperBLAST

DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis

25% id,
81% cov

N515DRAFT_4260: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase
is similar to:
PaperBLAST

DAPX_BACSU / P16524: Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- from Bacillus subtilis

29% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory