Curated BLAST for Genomes

 

Curated BLAST

Searching in Dyella japonica UNC79MFTsu3.2 (Dyella79)

Found 1 curated entries in PaperBLAST's database that match 'deoxy%ribose dehydrogenase%alpha' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dyella japonica UNC79MFTsu3.2, or try another query

N515DRAFT_2295: isoquinoline 1-oxidoreductase, alpha subunit
is similar to:
PaperBLAST

C7A11_18890 / A0A1N7UJP4: 2-deoxy-D-ribose dehydrogenase α subunit from Pseudomonas simiae

57% id,
95% cov

N515DRAFT_1294: isoquinoline 1-oxidoreductase, alpha subunit
is similar to:
PaperBLAST

C7A11_18890 / A0A1N7UJP4: 2-deoxy-D-ribose dehydrogenase α subunit from Pseudomonas simiae

42% id,
98% cov

N515DRAFT_4010: isoquinoline 1-oxidoreductase, alpha subunit
is similar to:
PaperBLAST

C7A11_18890 / A0A1N7UJP4: 2-deoxy-D-ribose dehydrogenase α subunit from Pseudomonas simiae

36% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory