Searching in Herbaspirillum seropedicae SmR1 (HerbieS)
Found 23 curated entries in PaperBLAST's database that match '1.1.1.103' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 16 relevant proteins in Herbaspirillum seropedicae SmR1, or try another query
| HSERO_RS00730: 4-hydroxybutyrate dehydrogenase is similar to: | PaperBLAST |
YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli | 34% id, 92% cov |
| HSERO_RS04830: alcohol dehydrogenase is similar to: | PaperBLAST |
TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus | 32% id, 99% cov |
TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii | 31% id, 100% cov |
TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis | 30% id, 99% cov |
| HSERO_RS17015: sulfurtransferase is similar to: | PaperBLAST |
TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus | 31% id, 99% cov |
PGA1_c34320: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Phaeobacter inhibens | 30% id, 99% cov |
O31776: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Bacillus subtilis | 30% id, 92% cov |
| HSERO_RS13615: alcohol dehydrogenase is similar to: | PaperBLAST |
TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus | 30% id, 97% cov |
TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii | 28% id, 98% cov |
TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus | 27% id, 99% cov |
| HSERO_RS05485: phosphoesterase is similar to: | PaperBLAST |
TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis | 31% id, 90% cov |
TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii | 30% id, 91% cov |
TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli | 29% id, 94% cov |
| HSERO_RS14040: alcohol dehydrogenase is similar to: | PaperBLAST |
O31776: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Bacillus subtilis | 29% id, 93% cov |
TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus | 27% id, 97% cov |
TDH_THEKO / Q5JI69: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Thermococcus kodakarensis | 32% id, 72% cov |
| HSERO_RS15385: hypothetical protein is similar to: | PaperBLAST |
Q97BK3: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermoplasma volcanium | 27% id, 97% cov |
TDH_PIG / Q8MIR0: L-threonine 3-dehydrogenase, mitochondrial; EC 1.1.1.103 from Sus scrofa | 25% id, 80% cov |
| HSERO_RS02795: alcohol dehydrogenase is similar to: | PaperBLAST |
TDH_PYRFU / Q8U259: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus furiosus | 28% id, 94% cov |
TDH_PYRHO / O58389: L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii | 28% id, 93% cov |
TDH_THET8 / Q5SKS4: L-threonine 3-dehydrogenase; TDH; EC 1.1.1.103 from Thermus thermophilus | 29% id, 88% cov |
| HSERO_RS18570: maleylacetate reductase is similar to: | PaperBLAST |
YiaY / b3589: L-threonine dehydrogenase (EC 1.1.1.103) from Escherichia coli | 29% id, 83% cov |
| HSERO_RS22435: zinc-binding dehydrogenase is similar to: | PaperBLAST |
TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli | 27% id, 75% cov |
| HSERO_RS13735: UDP-glucose 4-epimerase is similar to: | PaperBLAST |
E3PS87: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Acetoanaerobium sticklandii | 23% id, 76% cov |
| HSERO_RS20975: UDP-galactose-4-epimerase is similar to: | PaperBLAST |
E3PS87: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Acetoanaerobium sticklandii | 25% id, 69% cov |
| HSERO_RS05070: UDP-glucose 4-epimerase is similar to: | PaperBLAST |
Q7YW97: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Trypanosoma brucei | 27% id, 62% cov |
| HSERO_RS20995: NAD dependent epimerase/dehydratase is similar to: | PaperBLAST |
E3PS87: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Acetoanaerobium sticklandii | 24% id, 66% cov |
D6PBM7: L-threonine 3-dehydrogenase (EC 1.1.1.103) from uncultured archaeon | 25% id, 62% cov |
Q97BK3: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermoplasma volcanium | 26% id, 52% cov |
| HSERO_RS23040: NAD-dependent dehydratase is similar to: | PaperBLAST |
Q7YW97: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Trypanosoma brucei | 27% id, 55% cov |
Q97BK3: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermoplasma volcanium | 28% id, 53% cov |
E3PS87: L-threonine 3-dehydrogenase (EC 1.1.1.103) from Acetoanaerobium sticklandii | 25% id, 57% cov |
| HSERO_RS17735: quinone oxidoreductase is similar to: | PaperBLAST |
TDH_ECOLI / P07913: L-threonine 3-dehydrogenase; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Escherichia coli | 32% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 15 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3521137-3522198 (frame +1) on NC_014323 is similar to: | PaperBLAST |
TDH_PIG / Q8MIR0: L-threonine 3-dehydrogenase, mitochondrial; EC 1.1.1.103 from Sus scrofa | 25% id, 82% cov |
Lawrence Berkeley National Laboratory